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SRX5094598: Exome Capture of Triticum dicoccoides: Rosh Pinna, sample FT-4-19, 2008
1 ILLUMINA (Illumina HiSeq 2500) run: 1.8M spots, 452M bases, 160.5Mb downloads

Design: DNA: Macherey-Nagel NucleoSpin Plant II, Library: Kapa HyperPlus DNA, BIOO NEXTflex96 Adapters, Size selection: Agencourt AMPure XP beads, Capture: Nimblegen SeqCap EZ Design panel, SeqCap EZ HyperCap Workflow, Seq: Two HiSeq lanes with SBS v4 2x125 bases
Submitted by: Agriculture & Agri-Food Canada
Study: Triticum dicoccoides Genome Sequencing Using Exome Capture
PRJNA507456 • SRP172451 • All experiments • All runs
show Abstracthide Abstract
Ten populations of wild emmer (Triticum dicoccoides) were collected 28 years apart. Single nucleotide polymorphisms (SNPs) were detected using exome capture sequences. Focus was placed on those SNPs that were deleterious and associated with the two sample times to examine the change in diversity over time.
Sample: The tissue originated from seed that was increased once from seed collected either in 1980 or 2008.
SAMN10505761 • SRS4106207 • All experiments • All runs
Organism: Triticum dicoccoides
Library:
Name: 2008-04-19-FT_S59
Instrument: Illumina HiSeq 2500
Strategy: WXS
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 1.8M spots, 452M bases, 160.5Mb
Run# of Spots# of BasesSizePublished
SRR82795691,793,737452M160.5Mb2020-07-01

ID:
6871060

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